| WV P | [Window averaging - over Patches] |
| WV S | [Window averaging - Sequential document search] |
.OUTPUT FILE: AVE001
[Enter the name of the file where the average is to be
kept.]
.X & Y DIMENSIONS: 480,480
[Window size??]
.DOCUMENT FILE: DOC001
[Enter the name of the document file containing the
coordinates for the windowing of the large data file previously
created by using 'PK' on a cross-correlation map. If the
keys in the document file (i.e. the peak numbers) are strictly
sequential, with no multiple entries, then the computation
can be speeded up by using the 'WV S' (sequential search)
option]
.PEAK NUMBERS: 12-54
[Enter the key numbers of the document file to be used.
Current limitation is 4000 peaks.]
.NUMBER OF PEAKS FIXED? (Y/N): Y
[If the answer is 'Y', for each peak that is skipped on
account of its position outside of the window, an
additional peak with a higher number than specified in the
previous line is used. This way the number of peaks used
for the average is fixed. With answer 'N', no additional
peaks will be used to make up for the skipped ones.]
.PEAK NUMBER INCREMENT: 2
[Enter the increment of the peak numbers to be used. In
the case shown, peaks #12,14,16,18,... will be used.]
.CONTROL WINDOWS? (Y/N): Y
[Enter 'Y' if you want to create files containing the
windows used for window averaging. These are mainly used for
checking resolution, Q-factor analysis, and other
statistical checks (see Kessel,Radermacher,Frank,
J.Microscopy 1985.]
.PREFIX OF CONTROL WINDOWS: CON***
[Enter the prefix of the files containing the control
windows. The file number will correspond to the peak
number used.]
NOTES