SPIDER: MN S (Montage of images - with individual Scaling)

MN S - Montage of images - with individual Scaling

(2/25/12)

PURPOSE: Put images from a series into montage with individual scaling. Example.

SEE ALSO

MN	[Montage of Images]

USAGE

.OPERATION: MN S

.FILE PREFIX OR TEMPLATE (EG. PIC***): TER***
[Enter file name template for the image series.]

.FILE NUMBERS: 1-5,12-16,20-28,31-38
[Enter numbers of files to be placed into montage. All files must have same dimensions as the first file.]

.NUMBER OF IMAGES PER ROW, MARGIN WIDTH: 5, 10
[Enter number of images per row of the montage, and margin width between images and around outside.]

.MARGIN VALUE: 0.5
[Enter value to be put in margin areas and unused areas.]

.OUTPUT FILE: MON001
[Enter name of file to receive montage image.]

NOTES

Each image is individually rescaled according to:
DNEW = (DOLD - FMIN) * 2./(FMAX - FMIN)
Consequently, the montage is scaled between 0.0 and 2.0. Each image comes out with full contrast.
This option should not be used if the individual images represent slices of a volume, since the inter-relation between the dynamic ranges of the different slices gets lost.