Usage Example - Operation: 'EC CL'

Extract Connected Clusters

Usage Example - Operation: 'EC STAT'

Extract Connected Clusters - Statistics

Usage Example - Operation: 'EC FILTER'

Extract Connected Clusters - Filter

Usage Example - Operation: 'EC SELECT'

Extract Connected Clusters - Select Cluster Voxels

Usage Example - Operation: 'EC CLOSE'

Extract Connected Clusters - Merge Close Clusters

Procedure used: ec.spi


.OPERATION: EC CL ;   Extract Connected Clusters
.INPUT FILE: sav_clusters ;   Volume file name (input)
.SLICE NUMBERS: 1-100   Slices used
.THRESHOLD LEVEL: 0.5   Threshold level
.CLUSTER OUTPUT FILE: eccl ;   Cluster file name (output)
.  
.OPERATION: EC STAT ;   Extract Connected Clusters - Statistics
.CLUSTER FILE: eccl ;   Cluster file name (input)
.STATISTICS DOC FILE: ecstat_doc ;   Statistics doc file name (output)
.  
.OPERATION: EC FILTER ;   Extract Connected Clusters - Filter
.CLUSTER DOC FILE: ecstat_doc ;   Cluster doc file name (input)
.CLUSTER INPUT FILE: eccl ;   Cluster file name (input)
.CLUSTER OUTPUT FILE: ecfilt ;   Cluster file name (output)
.  
.OPERATION: EC SELECT ;   Extract Connected Clusters - Filter
.LOCATION DOC FILE: ecsel_doc ;   Cluster doc file name (input)
.CLUSTER INPUT FILE: eccl ;   Cluster file name (input)
.CLUSTER OUTPUT FILE: ecfilt ;   Cluster file name (output)
.  
.OPERATION: EC CLOSE ;   Extract Connected Clusters - Merge close clusters
.CLUSTER DOC FILE: ecstat_doc ;   Cluster doc file name (input)
.THRESHOLD DISTANCE & STARTING CLUSTER: 32, 2 ;   Threshold distance, skip cluster 1
.CLUSTER INPUT FILE: ecfilt ;   Cluster file name (input)
.CLUSTER OUTPUT FILE: ecclose ;   Cluster file name (output)



ORIGINAL INPUT VOLUME
(Surface)
clusters_surf



' 'EC CL' OUTPUT
CLUSTER VOLUME
(Surface)
eccl_surf



'EC STAT' OUTPUT
DOCUMENT FILE
ecstat_doc



'EC FILTER' INPUT
DOCUMENT FILE
ecstat_doc
'EC FILTER' RESULTS FILE
ecfilt_resu
' 'EC FILTER' OUTPUT
CLUSTER VOLUME
(Surface)
ecsel_surf



'EC SELECT' INPUT
DOCUMENT FILE
ecsel_doc
' 'EC SELECT' OUTPUT
CLUSTER VOLUME
(Surface)
ecsel_surf



' 'EC CLOSE'
OUTPUT CLUSTER VOLUME
(Surface)
ecclose_surf