PDBCG3 | [PDB - Calculate center of gravity] |
PDBIF | [PDB - Find information] |
PDBRT3 | [PDB - Rotate by Euler angles in 3D space] |
PDBRT3A | [PDB - Rotate by Euler angles around arbitrary center] |
PDBRT3L | [PDB - Rotate PDB file around line] |
PDBSH | [PDB - SHift coordinates] |
PDBSTP | [PDB - Create PDB file from coordinate list] |
UUSAGE: PDB PTS .PDB INPUT FILE: aaa.pdb [Enter the name of the PDB file with extension 'pdb'] .DOCUMENT FILE: COORD001 [Enter the name of the output SPIDER document file. Coordinates in output file are in Angstroms.] NOTES: 1. Terminal atoms are skipped. 2. The first three document file columns are coordinates. 3. The fourth column is IRES*10000.+VATOM. IRES and Vatom is residue and atom iD, repectively. 4. The fifth column is temperature factors. 5. The sixth column is NR2*1000.+ISEN*10.+occupancy, NR2 is sheet id, and isen is chain id1. Occupancy is 1 or 0 to show atoms to be or missed in refinement. 6. The seventh column contains chain id2 followed NR2 number. 7. Implemented by Zhong Huang, Pawel A. Penczek. SUBROUTINES: PDB CALLER: DRIV1