These tools supplement the standard SPIDER visualization modules:
     WEB -- Classic image viewer for SPIDER
     JWeb -- Java-powered, platform-independent version of WEB.

Before first use SPIDER's Python Tools must be installed along with Spire. However the tools are independent of Spire once installed.

Image viewers

qview.py

A quick Spider image viewer, for applications that need to display images.

montage.py

View a montage of images.

montagefromdoc.py

View a montage of images selected by a SPIDER doc file.

viewstack.py

View images in a stack one-by-one.

classavg.py

View a montage of average images; clicking on any image brings up another montage of the image set of that average.

spiconvert.py

Convert SPIDER images to/from other formats.

Data plotting

scatter.py

Read a document file and display a scatterplot.

pyplot.py

Simple graphical interface to Gnuplot.

CTF tools

ctfmatch.py

A tool for analyzing the output from SPIDER's 'TF ED' command.

ctfdemo.py

Experiment with various CTF parameters used in SPIDER

ctfgroup.py

Assign micrographs to defocus groups.

ctfcircle.py

A dumb thing that puts a circle over a power spectrum

Other

verifybyview.py

Verify quality of particles.

xplor.py

Tree view of directory files

mkfilenums.py

List file numbers in SPIDER doc file.

xmippsel2spiderdoc.py

Convert a Xmipp sel file to a SPIDER doc file.

emancoords2spiderdoc.py

Convert EMAN coordinates file to a SPIDER doc file.